Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_1968PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mmc:Mmcs_1749 UBA/ThiF-type NAD/FAD binding fold. (726 aa)    
Predicted Functional Partners:
Mvan_1967
Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: mmc:Mmcs_1748 diguanylate cyclase/phosphodiesterase with GAF sensor.
 
     0.906
Mvan_1969
KEGG: mmc:Mmcs_1750 hypothetical protein.
       0.875
thiG
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.569
Mvan_5856
PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mmc:Mmcs_1444 pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
 
 
 0.513
Mvan_5993
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ade:Adeh_2929 UBA/ThiF-type NAD/FAD binding protein.
 
 
 0.468
Mvan_4291
KEGG: mmc:Mmcs_3848 cysteine synthases; TIGRFAM: cysteine synthases; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
 
 
 0.435
Mvan_1797
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: mmc:Mmcs_1399 UBA/ThiF-type NAD/FAD binding fold.
  
 
 0.426
Mvan_4527
KEGG: mmc:Mmcs_4027 hypothetical protein.
 
     0.412
Mvan_0081
PFAM: protein of unknown function DUF571; KEGG: mmc:Mmcs_0073 protein of unknown function DUF571.
  
     0.409
Mvan_0194
PFAM: conserved hypothetical protein 374; KEGG: mmc:Mmcs_0168 conserved hypothetical protein 374.
  
     0.406
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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