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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1969KEGG: mmc:Mmcs_1750 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Mvan_1967
Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: mmc:Mmcs_1748 diguanylate cyclase/phosphodiesterase with GAF sensor.
  
  
 0.977
Mvan_1968
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mmc:Mmcs_1749 UBA/ThiF-type NAD/FAD binding fold.
       0.866
Mvan_1918
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_1615 diguanylate cyclase/phosphodiesterase.
  
  
 0.771
Mvan_1989
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mpa:MAP2394 hypothetical protein.
  
  
 0.769
Mvan_4640
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase.
  
  
 0.764
Mvan_1667
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: cvi:CV1332 hypothetical protein.
  
  
 0.749
Mvan_1053
KEGG: fal:FRAAL1701 hypothetical protein; putative glycosyltransferase.
  
  
 0.544
Mvan_2792
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: mmc:Mmcs_3074 transcriptional regulator, TetR family.
  
  
 0.544
Mvan_1315
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: fal:FRAAL1347 putative TetR family transcriptional regulatory protein.
  
  
 0.452
Mvan_4078
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; Tetracyclin repressor domain protein; KEGG: nfa:nfa21420 putative transcriptional regulator.
  
  
 0.452
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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