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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_1981PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35. (521 aa)    
Predicted Functional Partners:
Mvan_1983
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1764 enoyl-CoA hydratase/isomerase.
 
 
 0.916
Mvan_1982
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1763 AMP-dependent synthetase and ligase.
 
    
0.906
Mvan_1985
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1766 enoyl-CoA hydratase/isomerase.
  
 
 0.894
Mvan_1980
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1761 AMP-dependent synthetase and ligase.
 
    
0.891
Mvan_1984
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2398 hypothetical protein.
  
 
 0.857
Mvan_1995
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1775 AMP-dependent synthetase and ligase.
  
     0.740
Mvan_1987
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2395c hypothetical protein.
 
 
 0.734
Mvan_3124
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mbo:Mb2959 phenolpthiocerol synthesis type-I polyketide synthase PpsD.
 
 0.697
Mvan_3126
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase.
 
 0.697
Mvan_0269
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR; KEGG: mmc:Mmcs_0244 beta-ketoacyl synthase.
 
 0.677
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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