Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_1986Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mpa:MAP2347 hypothetical protein. (258 aa)    
Predicted Functional Partners:
Mvan_1987
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2395c hypothetical protein.
 
   
 0.848
Mvan_0294
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rso:RSc1078 probable transcriptional regulatory DNA-binding transcription regulator protein.
  
     0.672
Mvan_1982
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1763 AMP-dependent synthetase and ligase.
 
   
 0.640
Mvan_1981
PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2401 FadD35.
 
   
 0.631
Mvan_1983
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1764 enoyl-CoA hydratase/isomerase.
 
   
 0.630
Mvan_1985
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_1766 enoyl-CoA hydratase/isomerase.
     
 0.588
Mvan_6046
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; KEGG: mbo:Mb0044c probable transcriptional regulatory protein (probably GntR-family).
 
  
 0.588
Mvan_1988
KEGG: mmc:Mmcs_1769 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.579
Mvan_1978
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: mmc:Mmcs_1760 transcriptional regulator, GntR family.
 
  
 0.569
Mvan_1984
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2398 hypothetical protein.
     
 0.557
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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