STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
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[Homology]
Score
Mvan_1997PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP2386c hypothetical protein. (346 aa)    
Predicted Functional Partners:
Mvan_1998
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_1778 acyl-CoA dehydrogenase-like protein.
  
 0.973
Mvan_1994
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2.
 
     0.965
Mvan_1993
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP2390c enoyl-CoA hydratase.
  
 0.936
Mvan_1996
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1776 amidohydrolase 2.
 
    0.921
Mvan_1995
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1775 AMP-dependent synthetase and ligase.
 
  
 0.907
Mvan_4171
PFAM: protein of unknown function DUF35; KEGG: mmc:Mmcs_3692 protein of unknown function DUF35.
 
 0.813
Mvan_2246
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_2030 acyl-CoA dehydrogenase-like protein.
 
     0.783
Mvan_0915
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit.
  
 0.754
Mvan_5066
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_4492 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
  
 0.754
Mvan_4167
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
  0.753
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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