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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2000KEGG: mmc:Mmcs_2017 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Mvan_1999
PFAM: Thiolase; KEGG: mmc:Mmcs_1779 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.729
Mvan_2001
PFAM: cytochrome P450; KEGG: mmc:Mmcs_3698 cytochrome P450.
       0.558
Mvan_2875
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0212 acyl-CoA dehydrogenase-like protein.
 
 
 0.534
Mvan_4270
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_0040 acyl-CoA dehydrogenase-like protein.
 
 
 0.529
Mvan_5430
PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: mmc:Mmcs_4813 colicin V production protein.
  
 
 0.525
Mvan_5213
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mbo:Mb3539c probable acetohydroxyacid synthase IlvX (acetolactate synthase).
  
 
 0.523
Mvan_4088
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_3628 MaoC-like dehydratase.
 
 
 0.516
Mvan_3194
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5211 acyl-CoA dehydrogenase, type 2-like protein.
 
 
 0.515
Mvan_0394
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_5188 acyl-CoA dehydrogenase-like protein.
 
 
 0.501
Mvan_3918
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_0212 acyl-CoA dehydrogenase-like protein.
 
 
 0.496
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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