Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Mvan_2003PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mmc:Mmcs_2009 formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (726 aa)    
Predicted Functional Partners:
Mvan_4116
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rme:Rmet_1522 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit.
  
 
 0.806
Mvan_3558
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: mmc:Mmcs_3292 cytochrome c, class I.
  
 
 0.694
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.672
Mvan_3009
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2720 transcriptional regulator, TetR family.
 
  
 0.635
Mvan_0275
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP3635 hypothetical protein.
 
  
 0.631
Mvan_5860
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_5306 transcriptional regulator, TetR family.
 
  
 0.597
Mvan_0752
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.594
Mvan_4109
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_4865 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.582
Mvan_2002
KEGG: mtc:MT2028 hypothetical protein.
       0.562
moaC
GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.511
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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