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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2010PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2380 FadD19_2. (550 aa)    
Predicted Functional Partners:
Mvan_5258
PFAM: cytochrome P450; KEGG: mmc:Mmcs_4677 cytochrome P450.
 
 0.779
Mvan_5208
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_4624 AMP-dependent synthetase and ligase.
  
   
 0.753
Mvan_5221
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
 
 0.746
Mvan_5216
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_4628 enoyl-CoA hydratase/isomerase.
 
 
 0.743
Mvan_1980
PFAM: AMP-dependent synthetase and ligase; KEGG: mmc:Mmcs_1761 AMP-dependent synthetase and ligase.
 
     0.736
Mvan_2012
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region.
 
  
 0.724
Mvan_5222
KEGG: mmc:Mmcs_4636 acetyl-CoA acyltransferase.
 
 
 0.703
Mvan_3124
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mbo:Mb2959 phenolpthiocerol synthesis type-I polyketide synthase PpsD.
  
 0.697
Mvan_3126
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: mmc:Mmcs_2835 beta-ketoacyl synthase.
  
 0.697
Mvan_5206
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4622 acyl-CoA dehydrogenase-like protein.
 
 
 0.683
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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