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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2011PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase. (204 aa)    
Predicted Functional Partners:
Mvan_3052
Allophanate hydrolase; PFAM: Amidase; KEGG: mmc:Mmcs_2764 amidase.
 
  
  0.915
Mvan_4052
PFAM: Amidase; KEGG: nfa:nfa22180 putative amidase.
 
  
  0.915
Mvan_2012
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region.
 
     0.877
Mvan_3053
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_2765 isochorismatase hydrolase.
  
     0.710
Mvan_2014
KEGG: mmc:Mmcs_1791 hypothetical protein.
 
     0.681
Mvan_2010
PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2380 FadD19_2.
  
   0.667
Mvan_1859
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_3544 isochorismatase hydrolase.
  
     0.660
Mvan_2013
Cyclohexanone monooxygenase; PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP2376c hypothetical protein.
  
    0.577
Mvan_0893
PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_C0259 isochorismatase hydrolase family protein.
  
     0.562
Mvan_1787
TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: mmc:Mmcs_1387 isochorismate synthases.
    
 0.532
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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