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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2012PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region. (339 aa)    
Predicted Functional Partners:
Mvan_2893
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_0319 ferredoxin.
 
 
 0.937
Mvan_5309
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_4710 ferredoxin.
 
 
 0.935
Mvan_5225
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4640 Rieske (2Fe-2S) region.
  
  
 
0.926
Mvan_2869
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_0296 Rieske (2Fe-2S) region.
  
  
 
0.925
Mvan_4186
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_3712 ferredoxin.
  
 
 0.925
Mvan_5211
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_4640 Rieske (2Fe-2S) region.
  
  
 
0.925
Mvan_2011
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase.
 
     0.877
Mvan_5237
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mpa:MAP0530c 3-ketosteroid-delta-1-dehydrogenase.
 
  
 0.742
Mvan_4243
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_3784 fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
 
  
 0.736
Mvan_2010
PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2380 FadD19_2.
 
  
 0.724
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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