STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
Mvan_2013Cyclohexanone monooxygenase; PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP2376c hypothetical protein. (542 aa)    
Predicted Functional Partners:
Mvan_2014
KEGG: mmc:Mmcs_1791 hypothetical protein.
       0.779
Mvan_2011
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase.
  
    0.588
Mvan_2012
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region.
     
 0.568
Mvan_0521
PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mmc:Mmcs_1662 epoxide hydrolase-like protein.
 
 
 0.442
Mvan_4998
PFAM: Epoxide hydrolase domain protein; KEGG: mpa:MAP1989c hypothetical protein.
 
 
 0.436
Mvan_2010
PFAM: AMP-dependent synthetase and ligase; KEGG: mpa:MAP2380 FadD19_2.
  
    0.433
Mvan_0673
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmc:Mmcs_0506 cation diffusion facilitator family transporter.
  
    0.409
Mvan_3194
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5211 acyl-CoA dehydrogenase, type 2-like protein.
 
   0.402
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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