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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2014KEGG: mmc:Mmcs_1791 hypothetical protein. (368 aa)    
Predicted Functional Partners:
Mvan_2013
Cyclohexanone monooxygenase; PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP2376c hypothetical protein.
       0.780
Mvan_2227
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2010 transcriptional regulator, TetR family.
 
     0.763
Mvan_1962
KEGG: mpa:MAP3547c hypothetical protein.
  
     0.753
Mvan_2231
KEGG: mpa:MAP3547c hypothetical protein.
  
     0.698
Mvan_2011
PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_1787 isochorismatase hydrolase.
 
     0.681
Mvan_4167
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
   
 0.676
Mvan_4170
KEGG: mmc:Mmcs_3691 hypothetical protein.
  
     0.660
Mvan_2012
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_1788 Rieske (2Fe-2S) region.
 
     0.651
Mvan_4233
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2.
  
     0.649
Mvan_0817
KEGG: mmc:Mmcs_3793 hypothetical protein.
  
     0.639
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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