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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2016PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase. (367 aa)    
Predicted Functional Partners:
Mvan_2018
PFAM: luciferase family protein; KEGG: mmc:Mmcs_1793 luciferase-like protein.
 
     0.922
Mvan_2017
KEGG: mmc:Mmcs_1792 protein of unknown function DUF1486.
       0.773
Mvan_5861
KEGG: mmc:Mmcs_5308 hypothetical protein.
  
     0.729
Mvan_0818
KEGG: mmc:Mmcs_3792 hypothetical protein.
  
     0.718
Mvan_2015
PFAM: regulatory protein, TetR; KEGG: sma:SAV431 TetR-family transcriptional regulator.
 
     0.703
Mvan_2968
PFAM: regulatory protein, TetR; KEGG: bba:Bd2155 putative transcriptional regulator.
  
     0.689
Mvan_0817
KEGG: mmc:Mmcs_3793 hypothetical protein.
  
     0.686
Mvan_4220
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family.
  
     0.510
Mvan_4165
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2.
  
     0.472
Mvan_2353
KEGG: nfa:nfa43510 hypothetical protein.
  
     0.469
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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