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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2018PFAM: luciferase family protein; KEGG: mmc:Mmcs_1793 luciferase-like protein. (347 aa)    
Predicted Functional Partners:
Mvan_2016
PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase.
 
     0.922
Mvan_2017
KEGG: mmc:Mmcs_1792 protein of unknown function DUF1486.
       0.855
Mvan_3433
PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2486 aminoglycoside phosphotransferase.
 
     0.789
Mvan_4223
SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_3833 protein of unknown function DUF227.
 
     0.708
Mvan_4220
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family.
  
     0.703
Mvan_4259
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein.
  
     0.691
Mvan_1819
KEGG: mmc:Mmcs_1557 hypothetical protein.
  
     0.685
Mvan_2602
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2.
 
     0.669
Mvan_3374
PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2512 aminoglycoside phosphotransferase.
 
     0.661
Mvan_4134
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2.
 
     0.657
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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