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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2020KEGG: mmc:Mmcs_1795 putative oxidoreductase. (343 aa)    
Predicted Functional Partners:
Mvan_5840
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0126 hypothetical protein.
  
   
 0.761
Mvan_2021
PFAM: cytochrome P450; KEGG: mpa:MAP2371c hypothetical protein.
       0.743
Mvan_5261
Hypothetical protein; PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: mpa:MAP0519c hypothetical protein.
  
   
 0.677
Mvan_1732
Coenzyme F420-0 gamma-glutamyl ligase; TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: nitroreductase; protein of unknown function DUF129; KEGG: mmc:Mmcs_1323 uncharacterised conserved protein UCP005026.
 
  
 0.668
Mvan_5752
PFAM: luciferase family protein; KEGG: mpa:MAP0128c hypothetical protein.
  
   
 0.659
Mvan_0757
PFAM: luciferase family protein; KEGG: mbo:Mb2917 possible oxidoreductase.
  
     0.658
Mvan_3595
PFAM: luciferase family protein; KEGG: mpa:MAP1963c hypothetical protein.
  
   
 0.612
Mvan_1733
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: mmc:Mmcs_1324 LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.600
Mvan_2019
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mpa:MAP2372 AccD4_2.
       0.589
Mvan_4885
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4343 hypothetical protein.
  
   
 0.578
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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