STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2058PFAM: regulatory protein, LuxR; metal-dependent phosphohydrolase, HD sub domain; Bacterio-opsin activator, HTH domain protein; KEGG: mpa:MAP3352c hypothetical protein. (521 aa)    
Predicted Functional Partners:
Mvan_3797
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein.
 
 
 0.902
Mvan_5263
PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein.
  
 
 0.896
Mvan_1967
Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: mmc:Mmcs_1748 diguanylate cyclase/phosphodiesterase with GAF sensor.
 
 
 0.895
Mvan_2109
Diguanylate cyclase with PAS/PAC sensor; KEGG: xcv:XCV4470 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.884
Mvan_1667
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: cvi:CV1332 hypothetical protein.
 
 
 0.875
Mvan_1918
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_1615 diguanylate cyclase/phosphodiesterase.
 
 
 0.875
Mvan_1931
KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein.
  
 
 0.873
Mvan_2057
KEGG: mpa:MAP3353c hypothetical protein.
       0.794
Mvan_2839
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mmc:Mmcs_3025 adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 
 0.746
Mvan_4640
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mmc:Mmcs_2215 diguanylate cyclase/phosphodiesterase.
 
 
 0.737
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.