close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2104PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_1874 phospholipid/glycerol acyltransferase. (294 aa)    
Predicted Functional Partners:
Mvan_2103
Ornithine-acyl[acyl carrier protein] N-acyltransferase; KEGG: mmc:Mmcs_1873 hypothetical protein.
 
  
 0.983
Mvan_2105
PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mmc:Mmcs_1875 aminotransferase, class V.
       0.777
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.777
Mvan_4074
PFAM: phospholipid/glycerol acyltransferase; KEGG: mmc:Mmcs_3618 phospholipid/glycerol acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.671
Mvan_2222
PFAM: phosphatidate cytidylyltransferase; KEGG: mmc:Mmcs_2005 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.645
Mvan_2100
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: mmc:Mmcs_1871 electron transfer flavoprotein, alpha subunit.
 
     0.627
Mvan_2101
PFAM: dihydrodipicolinate reductase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: bbr:BB3700 hypothetical protein.
   
   0.563
Mvan_2099
PFAM: electron transfer flavoprotein beta-subunit; KEGG: mmc:Mmcs_1870 electron transfer flavoprotein beta-subunit.
  
    0.529
Mvan_2102
PFAM: Cupin 2, conserved barrel domain protein; KEGG: sco:SCO7126 hypothetical protein.
  
    0.527
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
  
 0.501
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.