Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_2164PFAM: Vitamin K epoxide reductase; KEGG: mmc:Mmcs_1942 vitamin K epoxide reductase. (211 aa)    
Predicted Functional Partners:
Mvan_2163
KEGG: mmc:Mmcs_1941 hypothetical protein.
 
  
 0.970
Mvan_2162
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_1940 alpha/beta hydrolase fold-3.
       0.704
Mvan_3690
PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase.
 
  
 0.696
Mvan_3237
PFAM: DSBA oxidoreductase; KEGG: mmc:Mmcs_1468 DsbA oxidoreductase.
 
  
 0.677
Mvan_2165
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.586
Mvan_2166
TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: mmc:Mmcs_1944 conserved hypothetical protein 95.
       0.536
Mvan_0977
KEGG: mmc:Mmcs_0755 hypothetical protein.
  
  
 0.518
Mvan_2161
PFAM: aldo/keto reductase; KEGG: mmc:Mmcs_1938 2,5-didehydrogluconate reductase.
  
    0.494
Mvan_5558
PFAM: DSBA oxidoreductase; KEGG: sco:SCO5993 hypothetical protein.
 
  
 0.476
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.408
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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