STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2240PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_2021 alcohol dehydrogenase, zinc-binding protein. (322 aa)    
Predicted Functional Partners:
Mvan_5590
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pac:PPA0918 putative zinc-binding sorbitol dehydrogenase.
  
  
  0.951
Mvan_4916
PFAM: PfkB domain protein; KEGG: mmc:Mmcs_4360 PfkB.
 
 
 0.924
xylA
KEGG: lxx:Lxx03370 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
  
  
 0.919
Mvan_0094
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
 
 0.916
Mvan_2242
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2023 short-chain dehydrogenase/reductase SDR.
 
  
 0.899
Mvan_2239
PFAM: cytochrome P450; KEGG: mmc:Mmcs_2020 cytochrome P450.
 
   
 0.893
Mvan_2244
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mmc:Mmcs_2028 alpha/beta hydrolase fold-3.
     
 0.878
Mvan_2238
KEGG: mmc:Mmcs_2019 hypothetical protein.
       0.872
Mvan_2241
PFAM: HpcH/HpaI aldolase; KEGG: mmc:Mmcs_2022 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.853
Mvan_1699
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bja:blr6296 probable GDP-mannose 6-dehydrogenase.
  
 
 0.824
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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