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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2248PFAM: luciferase family protein; KEGG: mmc:Mmcs_2032 luciferase-like protein. (306 aa)    
Predicted Functional Partners:
Mvan_4259
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein.
  
     0.719
Mvan_0319
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein.
  
   
 0.714
Mvan_4930
PFAM: luciferase family protein; KEGG: mmc:Mmcs_4374 luciferase-like protein.
  
     0.710
Mvan_4198
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3731 luciferase-like protein.
  
     0.691
Mvan_2247
PFAM: luciferase family protein; KEGG: mmc:Mmcs_2031 luciferase-like protein.
 
    
0.680
Mvan_1168
PFAM: luciferase family protein; KEGG: mmc:Mmcs_0862 hypothetical protein.
  
   
 0.589
Mvan_2018
PFAM: luciferase family protein; KEGG: mmc:Mmcs_1793 luciferase-like protein.
  
     0.576
Mvan_6020
KEGG: bxe:Bxe_A1381 putative xenobiotic compound monooxygenase, DszA family, A subunit.
 
    0.494
Mvan_0261
PFAM: luciferase family protein; KEGG: nfa:nfa26250 hypothetical protein.
  
     0.482
Mvan_1819
KEGG: mmc:Mmcs_1557 hypothetical protein.
  
   
 0.481
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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