Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_2255KEGG: mmc:Mmcs_2037 putative conserved transmembrane protein. (84 aa)    
Predicted Functional Partners:
Mvan_5053
KEGG: mpa:MAP0801 hypothetical protein.
  
 
   0.981
Mvan_5341
KEGG: mmc:Mmcs_4741 hypothetical protein.
  
 
   0.959
Mvan_3559
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3293 Rieske (2Fe-2S) region.
  
 
   0.956
Mvan_3558
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; PFAM: cytochrome c, class I; KEGG: mmc:Mmcs_3292 cytochrome c, class I.
    
   0.948
Mvan_3560
Menaquinol-cytochrome c reductase cytochrome b subunit precursor; PFAM: Cytochrome b/b6, N-terminal domain; KEGG: mmc:Mmcs_3294 cytochrome b/b6-like protein.
    
   0.948
Mvan_3564
PFAM: cytochrome c oxidase, subunit II; KEGG: mbo:Mb2223c probable transmembrane cytochrome C oxidase (subunit II) CtaC.
    
   0.948
Mvan_3563
Putative conserved integral membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.939
Mvan_0735
Superoxide dismutase, copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
   0.889
mqo
Malate--quinone oxidoreductase; KEGG: mmc:Mmcs_2069 malate dehydrogenase (acceptor); TIGRFAM: malate--quinone oxidoreductase; PFAM: FAD dependent oxidoreductase; Malate:quinone-oxidoreductase.
    
   0.889
Mvan_4062
KEGG: mtc:MT2544 hypothetical protein.
    
   0.889
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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