close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2270PFAM: regulatory protein, TetR; KEGG: fra:Francci3_0716 transcriptional regulator, TetR family. (200 aa)    
Predicted Functional Partners:
Mvan_2269
KEGG: mpa:MAP4305 hypothetical protein.
 
     0.838
Mvan_2268
KEGG: mpa:MAP4306 hypothetical protein.
 
 
 
 0.747
Mvan_0989
PFAM: regulatory protein, TetR; KEGG: mbo:Mb3860c transcriptional regulatory protein (probably TetR-family).
  
     0.719
Mvan_1962
KEGG: mpa:MAP3547c hypothetical protein.
  
     0.607
Mvan_3797
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein.
 
   
 0.581
Mvan_4272
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP4304 hypothetical protein.
  
  
 0.482
Mvan_2038
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP3105 hypothetical protein.
  
  
 0.442
Mvan_4046
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP0074 hypothetical protein.
  
   
 0.436
Mvan_0375
PFAM: regulatory protein, LysR; KEGG: mmc:Mmcs_0354 transcriptional regulator, LysR family.
   
 
 0.431
Mvan_4031
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mpa:MAP3522 OxyS_1; Belongs to the LysR transcriptional regulatory family.
   
 
 0.431
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.