Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_2292KEGG: mmc:Mmcs_2064 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Mvan_2293
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mmc:Mmcs_2065 cobalt ABC transporter CbiQ, permease subunit.
 
 
 0.995
Mvan_2291
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mmc:Mmcs_2063 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
  
 0.991
Mvan_2294
Cobalt ABC transporter, ATPase subunit; KEGG: mmc:Mmcs_2066 ABC transporter related; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.989
Mvan_2290
PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; Belongs to the GcvT family.
       0.603
Mvan_2289
PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: mlo:mll5367 hypothetical protein.
       0.573
Mvan_3431
Precorrin-2 C20-methyltransferase; KEGG: mmc:Mmcs_2487 precorrin-3B C17-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.549
Mvan_0896
KEGG: sco:SCO7618 transcriptional regulator.
  
     0.528
Mvan_3890
KEGG: mmc:Mmcs_1037 hypothetical protein.
 
     0.517
Mvan_3434
KEGG: mpa:MAP1817c precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.509
Mvan_2288
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; Helix-turn-helix, type 11 domain protein; KEGG: dra:DRA0211 transcriptional regulator, GntR family.
       0.487
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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