STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2365PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: fra:Francci3_1077 hydrogenase (NiFe) small subunit (HydA). (321 aa)    
Predicted Functional Partners:
Mvan_2366
Hydrogen:quinone oxidoreductase; PFAM: nickel-dependent hydrogenase, large subunit; KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase.
 
 0.999
Mvan_2364
KEGG: sru:SRU_0318 hypothetical protein.
   
 
 0.982
Mvan_4109
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mmc:Mmcs_4865 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.954
Mvan_2367
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; KEGG: fra:Francci3_1075 peptidase M52, hydrogen uptake protein.
 
  
 0.922
Mvan_2416
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mmc:Mmcs_2144 NADH ubiquinone oxidoreductase, 20 kDa subunit.
  
  
 
0.918
Mvan_0235
PFAM: N-acetyltransferase; KEGG: mmc:Mmcs_0211 arylamine N-acetyltransferase.
     
  0.900
Mvan_2368
KEGG: fra:Francci3_1074 hypothetical protein.
 
     0.850
Mvan_2370
PFAM: NHL repeat containing protein; KEGG: fra:Francci3_1073 NHL repeat protein.
 
     0.846
Mvan_2369
PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: sal:Sala_3205 nitrogen-fixing NifU-like.
 
   
 0.836
Mvan_2408
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: mmc:Mmcs_2137 hydrogenase assembly chaperone HypC/HupF.
 
 
 0.797
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.