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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2428Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_2156 ABC transporter related; TC 3.A.1.3.-. (264 aa)    
Predicted Functional Partners:
Mvan_2425
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2153 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-.
 0.999
Mvan_2426
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2154 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-.
 
 0.998
Mvan_2427
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_2155 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 0.996
Mvan_5576
L-cystine transport system substrate-binding protein; KEGG: mmc:Mmcs_4942 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 0.950
Mvan_4703
Glutamine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; KEGG: lin:lin0840 similar to Glutamine ABC transporter (binding and transport protein); TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 0.947
Mvan_2833
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_3033 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-.
 
 0.910
Mvan_1851
PFAM: extracellular solute-binding protein, family 3; KEGG: mxa:MXAN_5503 amino acid ABC transporter, permease protein/periplasmic amino acid-binding protein, His/Glu/Gln/Arg/opine family; TC 3.A.1.3.-.
 
 
 0.872
Mvan_2702
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: mmc:Mmcs_2403 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 
 0.872
Mvan_0704
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_0541 extracellular solute-binding protein, family 3; TC 3.A.1.3.-.
 
 
 0.871
Mvan_6047
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; KEGG: mmc:Mmcs_5383 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TC 3.A.1.3.-; TC 3.A.1.3.-.
 
 0.848
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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