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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2452KEGG: mmc:Mmcs_2178 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Mvan_3530
KEGG: mmc:Mmcs_3263 FHA domain containing protein.
  
     0.767
Mvan_5660
KEGG: mmc:Mmcs_5030 hypothetical protein.
 
     0.751
Mvan_6063
KEGG: mmc:Mmcs_5399 hypothetical protein.
  
     0.743
Mvan_2453
KEGG: mmc:Mmcs_2179 hypothetical protein.
 
     0.728
Mvan_3332
KEGG: mpa:MAP1342c hypothetical protein.
  
     0.706
Mvan_5668
KEGG: mmc:Mmcs_5041 hypothetical protein.
  
     0.706
Mvan_4119
KEGG: mpa:MAP2328c hypothetical protein.
  
     0.685
Mvan_3439
KEGG: mmc:Mmcs_2477 hypothetical protein.
  
     0.673
Mvan_4507
KEGG: mmc:Mmcs_4004 hypothetical protein.
  
     0.669
Mvan_3079
KEGG: mmc:Mmcs_2802 putative urease accessory protein.
  
     0.668
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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