Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_2602PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2. (409 aa)    
Predicted Functional Partners:
Mvan_2603
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family.
 
     0.919
Mvan_2600
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_2297 acyl-CoA dehydrogenase-like protein.
 
     0.859
Mvan_2601
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_2298 acyl-CoA dehydrogenase-like protein.
 
     0.837
Mvan_4964
PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmc:Mmcs_4408 NHL repeat.
 
    0.771
Mvan_4172
KEGG: mpa:MAP0732c hypothetical protein.
 
     0.767
Mvan_4167
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
   
 0.761
Mvan_4264
KEGG: mmc:Mmcs_3829 hypothetical protein.
 
     0.750
Mvan_2033
KEGG: mmc:Mmcs_3829 hypothetical protein.
 
     0.749
Mvan_4220
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3755 transcriptional regulator, TetR family.
 
     0.723
Mvan_4957
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mmc:Mmcs_4401 acyl-CoA dehydrogenase-like protein.
 
     0.709
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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