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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2829TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: mmc:Mmcs_3037 cytochrome d ubiquinol oxidase, subunit II. (346 aa)    
Predicted Functional Partners:
Mvan_2830
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: mmc:Mmcs_3036 cytochrome bd ubiquinol oxidase, subunit I.
 
 0.999
Mvan_2828
KEGG: mmc:Mmcs_3038 ABC transporter related; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
  
 0.996
Mvan_2827
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmc:Mmcs_3039 ABC transporter related.
 
  
 0.993
Mvan_4996
KEGG: cjk:jk0688 hypothetical protein.
  
  
 0.778
Mvan_3560
Menaquinol-cytochrome c reductase cytochrome b subunit precursor; PFAM: Cytochrome b/b6, N-terminal domain; KEGG: mmc:Mmcs_3294 cytochrome b/b6-like protein.
     
 0.654
Mvan_2831
PFAM: protein of unknown function DUF308, membrane; KEGG: mpa:MAP1317c hypothetical protein.
  
    0.653
Mvan_2826
KEGG: mmc:Mmcs_3040 hypothetical protein.
       0.647
atpFH
ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity).
  
  
 0.563
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
     
 0.547
nuoH
NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone (By similarity).
   
  
 0.538
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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