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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2884PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP1442 hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)    
Predicted Functional Partners:
Mvan_2883
PFAM: FAD dependent oxidoreductase; KEGG: mpa:MAP1441 hypothetical protein.
 
   
 0.813
Mvan_2848
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_0292 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.778
Mvan_5189
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_4606 short-chain dehydrogenase/reductase SDR.
 
   0.777
Mvan_5171
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6740 short-chain dehydrogenase/reductase SDR.
 
   0.767
Mvan_0614
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO1611 putative dehydrogenase.
 
   0.747
Mvan_0607
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: tma:TM1724 3-oxoacyl-(acyl carrier protein) reductase.
 
   0.736
Mvan_0609
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: cvi:CV1482 2,3-dihydroxybenzoate-2,3-dehydrogenase.
 
   0.736
Mvan_1991
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP2393c hypothetical protein.
 
   0.736
Mvan_5228
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_4646 short-chain dehydrogenase/reductase SDR.
 
   0.732
Mvan_0044
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_5285 short-chain dehydrogenase/reductase SDR.
 
   0.729
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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