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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_2986PFAM: acyltransferase 3; KEGG: mmc:Mmcs_2686 acyltransferase 3. (404 aa)    
Predicted Functional Partners:
Mvan_2985
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: mmc:Mmcs_2685 lipolytic enzyme, G-D-S-L.
 
   
 0.875
Mvan_5241
KEGG: mmc:Mmcs_0060 FHA domain containing protein.
  
     0.647
Mvan_6038
PFAM: protein of unknown function DUF1707; KEGG: mmc:Mmcs_5374 protein of unknown function DUF1707.
 
   
 0.609
Mvan_4096
KEGG: mmc:Mmcs_3636 putative conserved proline rich membrane protein.
  
     0.598
Mvan_5502
KEGG: mmc:Mmcs_4887 hypothetical protein.
  
     0.573
Mvan_5668
KEGG: mmc:Mmcs_5041 hypothetical protein.
  
     0.526
Mvan_4472
KEGG: mmc:Mmcs_3969 nuclease (RecB family)-like protein.
 
    0.524
Mvan_5388
KEGG: mmc:Mmcs_4788 putative conserved integral membrane protein.
 
  
 0.499
Mvan_1107
KEGG: bpe:BP1345 hypothetical protein.
 
    0.495
Mvan_1267
Methyltransferase type 12; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mbo:Mb2446 hypothetical protein.
 
   
 0.493
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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