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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3000PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_2711 short-chain dehydrogenase/reductase SDR. (248 aa)    
Predicted Functional Partners:
Mvan_2242
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmc:Mmcs_2023 short-chain dehydrogenase/reductase SDR.
  
  
 
0.912
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
 0.723
Mvan_2999
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: mmc:Mmcs_2707 competence-damaged protein; Belongs to the CinA family.
  
  
 0.671
Mvan_3001
PFAM: dihydrodipicolinate reductase; homoserine dehydrogenase, NAD-binding; KEGG: mmc:Mmcs_2712 dihydrodipicolinate reductase.
  
    0.585
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.528
Mvan_1369
PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_1069 cyclic nucleotide-binding protein.
  
 0.523
Mvan_1370
PFAM: cyclic nucleotide-binding; ATP-binding region, ATPase domain protein domain protein; KEGG: nfa:nfa52860 putative two-component system sensor kinase.
  
 0.523
Mvan_2998
KEGG: mmc:Mmcs_2709 hypothetical protein.
       0.522
Mvan_4818
PFAM: cyclic nucleotide-binding; KEGG: mmc:Mmcs_4284 cyclic nucleotide-binding protein.
  
 0.505
Mvan_5435
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mmc:Mmcs_4818 transcriptional regulator, Crp/Fnr family.
  
 0.505
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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