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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3149Methyltransferase type 12; PFAM: O-methyltransferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_1733 O-methyltransferase, family 2. (327 aa)    
Predicted Functional Partners:
Mvan_3148
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa17530 putative dehydrogenase.
  
  
 0.793
Mvan_3147
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cvi:CV1032 N-ethylammeline chlorohydrolase.
     
 0.784
Mvan_3146
PFAM: aminotransferase class-III; KEGG: gsu:GSU0151 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.779
Mvan_3145
PFAM: aldehyde dehydrogenase; KEGG: hal:VNG0937G glyceraldehyde-3-phosphate dehydrogenase.
     
 0.635
Mvan_3144
Hypothetical protein.
       0.626
Mvan_3143
Hypothetical protein; KEGG: cyb:CYB_2391 putative secreted protein.
       0.591
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
    0.476
Mvan_1002
PFAM: Sterol-binding domain protein; KEGG: gka:GK2783 hypothetical protein.
  
     0.465
Mvan_3141
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_0571 ABC transporter related.
  
  
 0.445
Mvan_3142
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_2832 ABC transporter, permease protein.
       0.431
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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