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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3155PFAM: Amidase; KEGG: rpb:RPB_2085 amidase; Belongs to the amidase family. (364 aa)    
Predicted Functional Partners:
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 
 0.953
Mvan_0647
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
    
 0.907
Mvan_5826
KEGG: rpc:RPC_2749 nitrile hydratase.
    
 0.907
acyP
PFAM: acylphosphatase; KEGG: mmc:Mmcs_1952 acylphosphatase.
    
 0.904
Mvan_0648
KEGG: rpb:RPB_2704 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain.
    
  0.903
Mvan_5825
TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: rpb:RPB_2704 nitrile hydratase, alpha subunit.
    
  0.903
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
 
 
 0.867
Mvan_3153
PFAM: Amidase; KEGG: bbr:BB0694 probable amidase.
 
    
0.838
Mvan_3152
PFAM: FAD dependent oxidoreductase; KEGG: gox:GOX0905 putative oxidoreductase.
 
     0.809
Mvan_3150
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cyb:CYB_1536 amidohydrolase family protein.
     
 0.792
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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