Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_3166KEGG: mmc:Mmcs_2857 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Mvan_3165
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_2856 fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
       0.817
Mvan_3041
PFAM: Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_2755 carboxymuconolactone decarboxylase.
  
     0.747
Mvan_5241
KEGG: mmc:Mmcs_0060 FHA domain containing protein.
  
     0.744
Mvan_0590
KEGG: mmc:Mmcs_0431 hypothetical protein.
  
     0.707
Mvan_2227
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2010 transcriptional regulator, TetR family.
  
     0.705
Mvan_3167
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: mpa:MAP1528 hypothetical protein.
       0.649
Mvan_0711
KEGG: mpa:MAP3901 hypothetical protein.
  
     0.641
Mvan_0773
KEGG: mmc:Mmcs_0614 hypothetical protein.
  
     0.634
Mvan_0959
PFAM: Mammalian cell entry related domain protein; KEGG: mpa:MAP1851 hypothetical protein.
  
     0.624
Mvan_2014
KEGG: mmc:Mmcs_1791 hypothetical protein.
  
     0.602
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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