STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3205PFAM: glycosyl transferase, group 1; KEGG: mpa:MAP3246 hypothetical protein. (381 aa)    
Predicted Functional Partners:
Mvan_2784
KEGG: mmc:Mmcs_3082 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
  
 0.698
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.696
Mvan_5245
PFAM: glycosyl transferase, group 1; KEGG: sil:SPO1536 glycosyltransferase, group 1.
  
     0.582
Mvan_5248
PFAM: glycosyl transferase, group 1; KEGG: sru:SRU_2402 glycosyl transferase.
  
     0.579
Mvan_1807
ATP-dependent DNA helicase, Rep family; PFAM: UvrD/REP helicase; HRDC domain protein; KEGG: mmc:Mmcs_1409 UvrD/REP helicase.
   
 
 0.542
Mvan_3206
PFAM: CheB methylesterase; KEGG: mpa:MAP3235c putative protein-glutamate methyltransferase protein.
       0.526
Mvan_1192
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.506
Mvan_4300
KEGG: mmc:Mmcs_3859 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.
  
 
 0.506
Mvan_1699
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bja:blr6296 probable GDP-mannose 6-dehydrogenase.
 
  
 0.498
Mvan_1703
PFAM: sugar transferase; KEGG: mmc:Mmcs_1295 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.498
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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