Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_3232KEGG: mmc:Mmcs_1159 hypothetical protein. (198 aa)    
Predicted Functional Partners:
Mvan_4233
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2.
  
     0.691
Mvan_2603
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2300 transcriptional regulator, TetR family.
  
     0.639
Mvan_4232
PFAM: peptidase M24; KEGG: mmc:Mmcs_3765 peptidase M24.
 
     0.623
Mvan_3374
PFAM: aminoglycoside phosphotransferase; SMART: protein of unknown function DUF227; KEGG: mmc:Mmcs_2512 aminoglycoside phosphotransferase.
  
     0.596
Mvan_2332
KEGG: afm:Afu6g14570 hypothetical protein.
  
     0.562
Mvan_0876
KEGG: mmc:Mmcs_5162 hypothetical protein.
  
     0.561
Mvan_4242
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3783 luciferase-like protein.
  
     0.558
Mvan_4231
PFAM: peptidase M24; KEGG: mmc:Mmcs_3764 peptidase M24.
 
     0.548
Mvan_2227
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_2010 transcriptional regulator, TetR family.
  
     0.533
Mvan_4434
PFAM: alpha/beta hydrolase fold; KEGG: mpa:MAP2492c hypothetical protein.
  
     0.532
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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