close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3389PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2565 binding-protein-dependent transport systems inner membrane component. (291 aa)    
Predicted Functional Partners:
Mvan_3390
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_2564 binding-protein-dependent transport systems inner membrane component.
 
 0.999
Mvan_3388
PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2566 twin-arginine translocation pathway signal.
 
 
 0.998
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.994
Mvan_5732
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1435 ABC transporter, permease protein.
 
  
 0.927
Mvan_6023
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0112 spermidine/putrescine ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.898
Mvan_5739
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related.
 
 0.894
Mvan_5731
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmc:Mmcs_5124 ABC transporter related.
 
 0.885
Mvan_3091
ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fra:Francci3_1590 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.876
Mvan_5740
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmc:Mmcs_5125 binding-protein-dependent transport systems inner membrane component.
 
  
 0.839
Mvan_3170
PFAM: FAD dependent oxidoreductase; KEGG: mmc:Mmcs_2861 FAD dependent oxidoreductase.
 
    0.666
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.