STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Mvan_3402PFAM: beta-lactamase domain protein; KEGG: mbo:Mb1948 hypothetical protein. (243 aa)    
Predicted Functional Partners:
Mvan_3403
PFAM: DoxX family protein; KEGG: mmc:Mmcs_2517 DoxX.
       0.571
Mvan_5081
KEGG: mbo:Mb0328 possible conserved exported protein.
  
     0.510
Mvan_0400
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mxa:MXAN_4126 ferredoxin reductase.
   
 0.460
Mvan_1831
PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 0.460
Mvan_4022
PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmc:Mmcs_5311 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 0.460
Mvan_2440
PFAM: LGFP repeat protein; KEGG: mmc:Mmcs_2167 LGFP.
  
  
 0.447
Mvan_1947
PFAM: protein of unknown function DUF190; KEGG: mbo:Mb3098 hypothetical protein.
  
     0.432
Mvan_3838
KEGG: mbo:Mb2396 hypothetical protein.
  
     0.418
mhpA
Monooxygenase, FAD-binding protein; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI).
 
  
 0.402
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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