STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3407PFAM: copper amine oxidase; KEGG: cyb:CYB_2794 putative copper methylamine oxidase. (670 aa)    
Predicted Functional Partners:
Mvan_1178
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa30780 putative oxidoreductase.
 
 
 0.929
Mvan_1866
Amine oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; amine oxidase; FAD dependent oxidoreductase; KEGG: mmc:Mmcs_1556 amine oxidase (flavin-containing).
 
 
 0.926
Mvan_5578
PFAM: amine oxidase; KEGG: nfa:nfa30780 putative oxidoreductase.
 
 
 0.926
Mvan_3280
PFAM: O-methyltransferase, family 3; KEGG: mtc:MT1743 catechol-O-methyltransferase.
  
  
 0.912
Mvan_2218
PFAM: copper amine oxidase; KEGG: mmc:Mmcs_2000 amine oxidase (copper-containing).
  
  
 
0.910
Mvan_5896
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpa:MAP0136 hypothetical protein.
     
  0.800
Mvan_3406
PFAM: protein of unknown function UPF0060; KEGG: mmc:Mmcs_2513 protein of unknown function UPF0060.
  
    0.776
Mvan_0105
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0090 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.719
Mvan_0240
PFAM: aldehyde dehydrogenase; KEGG: mmc:Mmcs_0217 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.719
Mvan_0904
PFAM: aldehyde dehydrogenase; KEGG: nfa:nfa46630 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.719
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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