close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3537KEGG: mmc:Mmcs_3270 hypothetical protein. (529 aa)    
Predicted Functional Partners:
Mvan_3536
Geranylgeranyl-diphosphate synthase; PFAM: Polyprenyl synthetase; KEGG: mmc:Mmcs_3269 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.860
Mvan_3535
LppM; KEGG: mmc:Mmcs_3268 LppM.
 
     0.753
Mvan_3534
PFAM: GCN5-related N-acetyltransferase; KEGG: mmc:Mmcs_3267 hypothetical protein.
 
   
 0.694
Mvan_0666
PFAM: glycoside hydrolase, family 76; KEGG: mmc:Mmcs_0485 glycoside hydrolase, family 76.
  
     0.641
Mvan_0976
KEGG: mmc:Mmcs_0752 putative conserved transmembrane protein.
  
     0.606
Mvan_3923
KEGG: mmc:Mmcs_3527 hypothetical protein.
 
  
 0.600
Mvan_1479
KEGG: mmc:Mmcs_1138 hypothetical protein.
 
     0.590
Mvan_4626
KEGG: mmc:Mmcs_4103 hypothetical protein.
  
     0.587
Mvan_1738
KEGG: mmc:Mmcs_1329 hypothetical protein.
 
   
 0.584
Mvan_0676
KEGG: mmc:Mmcs_0514 hypothetical protein.
 
    0.581
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.