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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3923KEGG: mmc:Mmcs_3527 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Mvan_3922
TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: mmc:Mmcs_3526 DegV family protein.
     
 0.940
gpgP
Phosphoglycerate mutase; Involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharides (MGLP). Catalyzes the dephosphorylation of glucosyl-3-phosphoglycerate (GPG) to glucosylglycerate.
  
  
 0.937
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.866
Mvan_2095
PFAM: transferase hexapeptide repeat containing protein; KEGG: mmc:Mmcs_1864 putative transferase.
 
   
 0.858
Mvan_2098
Glucose 6-O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmc:Mmcs_1869 methyltransferase type 11.
 
  
 0.846
nadD
Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.826
Mvan_2097
(1->4)-alpha-D-glucan branching enzyme; PFAM: glycoside hydrolase, family 57; KEGG: mmc:Mmcs_1868 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
  
   
 0.820
Mvan_2469
KEGG: mmc:Mmcs_2193 hypothetical protein.
 
  
 0.779
Mvan_3548
KEGG: mmc:Mmcs_3281 hypothetical protein.
 
     0.778
Mvan_1507
KEGG: mmc:Mmcs_1163 hypothetical protein.
  
     0.773
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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