STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_3962PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_3564 transglycosylase-like protein. (111 aa)    
Predicted Functional Partners:
Mvan_0008
KEGG: mmc:Mmcs_0008 hypothetical protein.
  
  
 0.559
Mvan_6069
PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase/autolysin; KEGG: mmc:Mmcs_5404 peptidoglycan-binding domain 1.
 
  
 0.540
Mvan_2729
TIGRFAM: ABC drug efflux pump, inner membrane subunit, DrrB family; PFAM: ABC-2 type transporter; KEGG: mmc:Mmcs_2432 ABC transporter, DrrB efflux protein.
 
     0.512
Mvan_2376
KEGG: mpa:MAP2876c hypothetical protein.
 
  
 0.493
mshD
GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
 
   
 0.473
Mvan_3961
PFAM: Transglycosylase domain protein; KEGG: mmc:Mmcs_3563 transglycosylase-like protein.
 
    
0.461
Mvan_2333
PFAM: NLP/P60 protein; KEGG: mpa:MAP1203 hypothetical protein.
  
  
 0.460
Mvan_2747
PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_2451 NLP/P60.
  
  
 0.460
Mvan_3656
PFAM: NLP/P60 protein; KEGG: mmc:Mmcs_1440 NLP/P60.
  
  
 0.460
Mvan_3953
PFAM: Saccharopine dehydrogenase; KEGG: mmc:Mmcs_3559 saccharopine dehydrogenase.
     
 0.459
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.