Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_4166PFAM: Rieske [2Fe-2S] domain protein; KEGG: mmc:Mmcs_3687 Rieske (2Fe-2S) region. (129 aa)    
Predicted Functional Partners:
Mvan_4165
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3686 amidohydrolase 2.
 
    0.967
Mvan_4164
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3685 amidohydrolase 2.
 
    0.957
Mvan_4167
KEGG: mmc:Mmcs_3688 hypothetical protein.
 
   
 0.943
Mvan_3494
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3231 nitrite reductase (NAD(P)H) large subunit, NirB.
 
  
 0.592
Mvan_1326
PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_4275 Rieske (2Fe-2S) region.
  
     0.531
Mvan_2305
TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmc:Mmcs_2074 uroporphyrin-III C-methyltransferase.
  
  
 0.525
Mvan_1994
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_1774 amidohydrolase 2.
 
    0.515
Mvan_0846
uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: mmc:Mmcs_0678 uroporphyrinogen III synthase HEM4.
  
  
 0.512
Mvan_2602
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_2299 amidohydrolase 2.
 
    0.500
Mvan_4134
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3656 amidohydrolase 2.
 
    0.491
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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