Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_4232PFAM: peptidase M24; KEGG: mmc:Mmcs_3765 peptidase M24. (422 aa)    
Predicted Functional Partners:
Mvan_4233
PFAM: amidohydrolase 2; KEGG: mmc:Mmcs_3766 amidohydrolase 2.
 
    0.947
Mvan_4230
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mmc:Mmcs_3763 enoyl-CoA hydratase/isomerase.
 
 
 
 0.937
Mvan_4231
PFAM: peptidase M24; KEGG: mmc:Mmcs_3764 peptidase M24.
 
    
0.911
Mvan_4229
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3762 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
   
 0.905
Mvan_4228
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mpa:MAP0709 hypothetical protein.
 
 
 
 0.904
Mvan_4241
KEGG: mmc:Mmcs_3782 short-chain dehydrogenase/reductase SDR.
 
 
 
 0.863
Mvan_4235
KEGG: mmc:Mmcs_3768 putative ferredoxin.
 
     0.845
Mvan_4240
KEGG: mmc:Mmcs_3781 hypothetical protein.
 
    0.829
Mvan_4236
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_3769 transcriptional regulator, TetR family.
     
 0.823
Mvan_4242
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3783 luciferase-like protein.
 
  
 0.767
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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