STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4258PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mmc:Mmcs_3823 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (351 aa)    
Predicted Functional Partners:
Mvan_4260
PFAM: cobalamin B12-binding domain protein; KEGG: mmc:Mmcs_3825 methylmalonyl-CoA mutase C-terminal domain protein.
     
 0.718
Mvan_4261
KEGG: mmc:Mmcs_3826 methylmalonyl-CoA mutase N-terminal domain protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
     
 0.716
Mvan_4259
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3824 luciferase-like protein.
       0.556
Mvan_4125
Fatty acid synthase, bacterial type; PFAM: beta-ketoacyl synthase; acyl transferase domain protein; MaoC domain protein dehydratase; 2-nitropropane dioxygenase, NPD; domain of unknown function DUF1729; KEGG: mmc:Mmcs_3648 MaoC-like dehydratase.
  
 0.532
Mvan_4218
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_3752 acyl-CoA dehydrogenase-like protein.
 
 
 0.520
Mvan_4954
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mmc:Mmcs_4396 thiamine pyrophosphate enzyme-like TPP-binding protein; Belongs to the TPP enzyme family.
 
 
 0.466
Mvan_1894
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: mmc:Mmcs_1588 pyruvate carboxyltransferase.
 
  0.456
Mvan_1997
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP2386c hypothetical protein.
 
 
 0.437
Mvan_3491
Sulfite reductase (NADPH) alpha subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: mmc:Mmcs_3229 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.437
Mvan_4262
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mmc:Mmcs_3827 short-chain dehydrogenase/reductase SDR.
   
 
 0.435
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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