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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4597KEGG: mmc:Mmcs_4087 hypothetical protein. (267 aa)    
Predicted Functional Partners:
Mvan_4598
KEGG: mmc:Mmcs_4088 hypothetical protein.
 
     0.946
Mvan_4599
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry.
 
    0.869
Mvan_4602
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1656 mammalian cell entry.
 
  
 0.867
Mvan_4604
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1524 mammalian cell entry.
 
    0.857
Mvan_4600
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mtc:MT2022 virulence factor mce family protein.
 
  
 0.842
Mvan_4601
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1657 mammalian cell entry.
 
  
 0.823
Mvan_4116
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rme:Rmet_1522 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit.
  
 0.814
Mvan_4596
KEGG: mmc:Mmcs_4084 protein of unknown function UPF0089.
 
 
 
 0.777
Mvan_0518
TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: mmc:Mmcs_1659 mammalian cell entry.
 
    0.775
Mvan_0919
KEGG: mmc:Mmcs_1530 hypothetical protein.
 
     0.774
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.