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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4697PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_4177 signal transduction histidine kinase regulating citrate/malate metabolism. (527 aa)    
Predicted Functional Partners:
Mvan_4698
PFAM: response regulator receiver; KEGG: mmc:Mmcs_4178 response regulator receiver and unknown domain protein.
 
 
 0.991
Mvan_3504
PFAM: response regulator receiver; KEGG: mmc:Mmcs_3239 response regulator receiver and unknown domain protein.
 
 
 0.925
Mvan_4696
PFAM: sodium:dicarboxylate symporter; KEGG: mmc:Mmcs_4176 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.871
Mvan_3502
PFAM: Uncharacterized protein UPF0065; KEGG: rha:RHA1_ro06623 hypothetical protein.
 
    0.572
Mvan_3501
KEGG: mmc:Mmcs_3236 integral membrane protein.
 
     0.469
Mvan_1931
KEGG: mmc:Mmcs_0350 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein.
  
  
 0.439
Mvan_3797
PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mpa:MAP2078c hypothetical protein.
  
  
 0.439
Mvan_3500
PFAM: protein of unknown function DUF112, transmembrane; KEGG: mmc:Mmcs_3235 protein of unknown function DUF112, transmembrane.
 
     0.416
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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