Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mvan_4698PFAM: response regulator receiver; KEGG: mmc:Mmcs_4178 response regulator receiver and unknown domain protein. (229 aa)    
Predicted Functional Partners:
Mvan_4697
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mmc:Mmcs_4177 signal transduction histidine kinase regulating citrate/malate metabolism.
 
 
 0.987
Mvan_4696
PFAM: sodium:dicarboxylate symporter; KEGG: mmc:Mmcs_4176 sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.814
Mvan_3503
PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold domain protein; KEGG: mmc:Mmcs_3238 signal transduction histidine kinase regulating citrate/malate metabolism.
 
   
 0.793
Mvan_3502
PFAM: Uncharacterized protein UPF0065; KEGG: rha:RHA1_ro06623 hypothetical protein.
 
    0.488
Mvan_5263
PFAM: GAF domain protein; KEGG: mmc:Mmcs_3585 putative GAF sensor protein.
     
 0.407
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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