close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4731PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cps:CPS_3939 pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent. (212 aa)    
Predicted Functional Partners:
Mvan_4733
PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO0461 hydrolase.
     0.923
Mvan_4732
PFAM: protein of unknown function DUF1348; KEGG: sma:SAV7472 hypothetical protein.
 
     0.886
Mvan_3180
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mmc:Mmcs_2875 ferredoxin.
      0.788
Mvan_3958
PFAM: ferredoxin; KEGG: nfa:nfa21080 putative oxidoreductase.
      0.739
Mvan_4730
KEGG: mpa:MAP1744 hypothetical protein.
       0.541
Mvan_4729
PFAM: regulatory protein, TetR; KEGG: mlo:mlr0908 probable transcriptional regulator.
       0.530
Mvan_4734
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rha:RHA1_ro04347 transcriptional regulator, LysR family.
       0.476
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.