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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvan_4773PFAM: iron permease FTR1; KEGG: rha:RHA1_ro05775 possible membrane protein. (303 aa)    
Predicted Functional Partners:
Mvan_4774
PFAM: protein of unknown function DUF451; KEGG: rha:RHA1_ro05774 hypothetical protein.
  
 0.997
Mvan_4775
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.979
Mvan_2157
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mmc:Mmcs_1602 Dyp-type peroxidase.
 
  
 0.879
Mvan_1635
TIGRFAM: Dyp-type peroxidase family; KEGG: mmc:Mmcs_0577 Dyp-type peroxidase.
  
  
 0.614
Mvan_0308
PFAM: periplasmic binding protein; KEGG: mmc:Mmcs_0270 twin-arginine translocation pathway signal.
  
  
 0.604
Mvan_2081
PFAM: periplasmic binding protein; KEGG: mmc:Mmcs_1851 periplasmic binding protein.
  
  
 0.604
Mvan_5122
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: mbo:Mb0822c putative iron-dependent peroxidase.
  
  
 0.600
Mvan_4772
KEGG: mmc:Mmcs_4241 putative conserved lipoprotein LpqU.
       0.567
Mvan_5737
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mmc:Mmcs_5122 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
  
    0.552
Mvan_5742
KEGG: mmc:Mmcs_5127 extracellular solute-binding protein, family 1.
 
  
 0.540
Your Current Organism:
Mycolicibacterium vanbaalenii
NCBI taxonomy Id: 350058
Other names: M. vanbaalenii PYR-1, Mycobacterium sp. PYR-1, Mycobacterium vanbaalenii DSM 7251, Mycobacterium vanbaalenii PYR-1, Mycolicibacterium vanbaalenii DSM 7251, Mycolicibacterium vanbaalenii PYR-1
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